CTD Cast Files
CalCOFI CTD Cast Files
calcofi_ctd-castCalCOFIunstatedv2026.09.11ingested
- years
- 1993–2026
- observations
- 18,126,607
- sampling events
- 9,630
- stations
- 97
- variables
- 43
- depth
- 0.968–3630 m
Overview
CTD downcast profiles with temperature, salinity, oxygen, fluorescence, and other sensors at standard depths. 1 m-binned final data for 1993-2002 come from the SIO-CalCOFI Technical Group’s own archive (J. Wilkinson), which covers the decade calcofi.org does not publish finals for; 1998 and 2003 onward come from calcofi.org. Where both publish the same cruise, calcofi.org is used; the two agree on 130 of 140 comparable files, and the four cruises that differ are recorded in question calcofi_ctd-cast_20.
Open with the provider
- Q28 license — proposed
- Q29 pi_names — proposed
calcofi.org page ↗source ↗ingest notebook ↗record JSON JSON-LD
Coverage
43 variables
beam_attenuation 1/mbtl_ammonium umol/Lbtl_chlorophyll_a ug/Lbtl_depth mbtl_nitrate umol/Lbtl_nitrite umol/Lbtl_phaeopigment ug/Lbtl_phosphate umol/Lbtl_silicate umol/Lbtl_temperature degCdynamic_height dyn mest_chlorophyll_a_cruise_corr ug/Lest_chlorophyll_a_sta_corr ug/Lest_nitrate_cruise_corr umol/Lest_nitrate_sta_corr umol/Lfluorescence_v Vall 43
isus_v Voxygen_btl_ml_l ml/Loxygen_btl_umol_kg umol/kgoxygen_ml_l_1 ml/Loxygen_ml_l_1_cruise_corr ml/Loxygen_ml_l_1_sta_corr ml/Loxygen_ml_l_2 ml/Loxygen_ml_l_2_cruise_corr ml/Loxygen_ml_l_2_sta_corr ml/Loxygen_ml_l_ave_sta_corr ml/Loxygen_umol_kg_1 umol/kgoxygen_umol_kg_2 umol/kgoxygen_umol_kg_ave_sta_corr umol/kgpar uE/m2/sph pHpressure dbarsalinity_1 PSUsalinity_1_corr PSUsalinity_2 PSUsalinity_2_corr PSUsalinity_ave_corr PSUsalinity_btl PSUsigma_theta_1 kg/m3spar uE/m2/sspecific_volume_anomaly 10^-8 m3/kgtemperature_ave degCtransmissometer %
Full resolution only · 11
Series this dataset carries that are not canonical for any measurement, so the catalog draws no page for them: they ride the full-resolution table (obs_ctd_full) at every scan, behind the headline series above.
- oxygen_saturation_1 Oxygen saturation sensor 1
- oxygen_saturation_2 Oxygen saturation sensor 2
- oxygen_umol_kg_1_cruise_corr DO sensor 1 cruise-corrected
- oxygen_umol_kg_1_sta_corr DO sensor 1 station-corrected
- oxygen_umol_kg_2_cruise_corr DO sensor 2 cruise-corrected
- oxygen_umol_kg_2_sta_corr DO sensor 2 station-corrected
- potential_temperature_1 Potential temperature sensor 1
- potential_temperature_2 Potential temperature sensor 2
- sigma_theta_2 Potential density sensor 2
- temperature_1 Temperature sensor 1
- temperature_2 Temperature sensor 2
Also contributes to
- Carbonate System — ph
- Nutrients & Chemistry — btl_ammonium, btl_nitrate, btl_nitrite, btl_phosphate, btl_silicate, est_nitrate_cruise_corr, est_nitrate_sta_corr, isus_v
- Productivity & Pigments — btl_chlorophyll_a, btl_phaeopigment, est_chlorophyll_a_cruise_corr, est_chlorophyll_a_sta_corr, fluorescence_v, par, spar
Access
Every endpoint this dataset can be reached through, grouped by how you would use it. Each name is the link; the copy button beside it copies the address. Everything is in the release record and was answered when the release was cut.
Apps that read this dataset from the release. The icons after a name are the app’s lenses — the spatial grain it shows the data at.
Every way to have the bytes, by source. Nothing here asks you to register first.
Tables from the release (Parquet)
The release’s own tables, as the parquet objects it is frozen from — the same bytes every app and package below reads. A table this dataset shares with others holds every dataset’s rows, so filter on dataset_key; a partition holds only this dataset’s. since is the release whose rows these are: an unchanged table keeps its object.
CF netCDF
One self-describing file, for a tool that reads netCDF.
how far this file is CF
Fully CF: this dataset has one sampling level with many depths per event, which is exactly a CF profile, so it needs no extension beyond the standard.
how far this file is CF
Fully CF: a single sampling level with a depth axis is a CF profile, so this dataset needs no extension beyond the standard.
ERDDAP (erddap.calcofi.io)
One ERDDAP dataset per grain. Subset in the browser or query it from a script; for netCDF take the CF file above.
- full resolution (pre-thinning)
- the unthinned series — every bin as the instrument recorded it, before the release's depth thinning
- observations
- one row per measurement — value, units and quality flag — joined to the sampling event it was taken on
- sampling events
- one row per cast, tow or transect: when, where and how it was sampled, with the effort that scales it
Legacy ids, still answering until 2026-12-04: calcofi_ctd_thin (replaced by calcofi_ctd-cast) · calcofi_ctd_measurement (replaced by calcofi_ctd-cast_full)
From the provider
The dataset as its provider publishes it, before CalCOFI ingested it.
The same release, from a script or a browser SQL shell.
Packages
The whole release, pinned to a version, with the citation one call away.
con <- calcofi4r::cc_get_db()
calcofi4r::cc_cite("calcofi_ctd-cast")
con = calcofi4py.cc_get_db()
calcofi4py.cite("calcofi_ctd-cast")
DuckDB, anywhere
No CalCOFI package needed: each table above is a plain parquet object, readable by any DuckDB (or Arrow, pandas, Spark) from its URL. The path carries a content hash — a table whose rows did not change between releases keeps the same object, so nothing unchanged is stored or downloaded twice. Swap in any table above; one shared with other datasets needs WHERE dataset_key = 'calcofi_ctd-cast'. Every object of every release is listed in db-schema.
SELECT *
FROM read_parquet('https://storage.googleapis.com/calcofi-db/ducklake/tables/obs/dataset_key=calcofi_ctd-cast/14f55db21599862db4a1823e/data_0.parquet')
LIMIT 100;
db-query, in the browser
__TBL:obs__ is db-query’s name for the pinned release’s obs object — the hashed path above, resolved for you — so the same SQL keeps working when a release changes the object.
-- calcofi_ctd-cast in the CalCOFI release v2026.09.11
SELECT *
FROM __TBL:obs__
WHERE dataset_key = 'calcofi_ctd-cast'
LIMIT 100;
Records about the data, in the standards each portal harvests.
Where this dataset is registered outside calcofi.io: each portal’s role, what it is for, the dataset’s status there and the identifier it is known by. The policy — which portal is the archive of record and why — is in Portals.
Policy Archive of record: none yet — a CalCOFI program dataset with no DOI-bearing deposit. EDI is the planned archive (package built and staged each release); NCEI planned through the SWFSC data manager. OBIS does not apply (no occurrences).
Everything here is open — nothing on calcofi.io asks you to register first. If this dataset ends up in something you build or publish, register your use so it can be credited and linked back; to hear when a release changes it, stay informed. Questions: data@calcofi.io.
Cite
This dataset's own citation. What to cite, and how, is a chapter of the docs book.
CalCOFI. (2023). CalCOFI CTD Cast Files. CalCOFI.org.
BibTeX
@misc{calcofi_ctd-cast,
title = {CalCOFI CTD Cast Files},
howpublished = {CalCOFI. (2023). CalCOFI CTD Cast Files. CalCOFI.org.},
year = {2023}
}
…and the release it came from
CalCOFI (2026). CalCOFI Integrated Database, release v2026.09.11 [Data set]. Scripps Institution of Oceanography, NOAA Fisheries, and California Department of Fish and Wildlife. https://calcofi.io/db-schema/?v=v2026.09.11
BibTeX
@misc{calcofi_release_v2026_09_11,
title = {CalCOFI Integrated Database, release v2026.09.11},
author = {CalCOFI},
year = {2026},
publisher = {Scripps Institution of Oceanography, NOAA Fisheries, and California Department of Fish and Wildlife},
url = {https://calcofi.io/db-schema/?v=v2026.09.11}
}
Source files
The original inputs the ingest notebook read, mirrored nightly from the shared Drive to the public files bucket — 246 files, 16.6 GB.
- 19-9003JD_CTDTest.zip1.6 MB2026-04-07
- 19-9011NH_CTDTest.zip5.5 MB2026-06-09
- 19-9101JD_CTDTest.zip3.1 MB2026-06-09
- 19-9103JD_CTDTest.zip2.9 MB2026-06-09
- 19-9108JD_CTDCast.zip14.4 MB2026-06-09
- 19-9110NH_CTDCast.zip6.6 MB2026-06-09
- 19-9202JD_CTDCastProdoStas.zip6.5 MB2026-06-09
- 19-9204JD_CTDTest01.zip400 KB2026-06-09
- 19-9207NH_CTDCastProdoStas.zip9.6 MB2026-06-09
- 19-9210NH_CTDCastProdoStas.zip11.2 MB2026-06-09
- 19-9210NH_CTDTest.zip3.5 MB2026-06-09
- 19-9301JD_CTDTest.zip2.4 MB2026-06-09
and 234 more
- 19-9304JD_CTDTest.zip1.2 MB2026-06-09
- 19-9308NH_CTDCast.zip55.2 MB2026-06-09
- 19-9310NH_CTDCast.zip47.4 MB2026-06-09
- 19-9401JD_CTDCast.zip53.3 MB2026-06-09
- 19-9403JD_CTDCast.zip53.4 MB2026-06-09
- 19-9408NH_CTDCast.zip53.8 MB2026-06-09
- 19-9410NH_CTDCast.zip51.5 MB2026-06-09
- 19-9501JD_CTDCast.zip59.2 MB2026-06-09
- 19-9504NH_CTDCast.zip55.2 MB2026-06-09
- 19-9507JD_CTDCast.zip53.4 MB2026-06-09
- 19-9510NH_CTDCast.zip110 MB2026-06-09
- 19-9602JD_CTDCast.zip54.4 MB2026-06-09
- 19-9604JD_CTDCast.zip53.7 MB2026-06-09
- 19-9608NH_CTDCast.zip63.3 MB2026-06-09
- 19-9610RR_CTDCast.zip85.3 MB2026-06-09
- 19-9702JD_CTDCast.zip53.2 MB2026-06-09
- 19-9704NH_CTDCast.zip58.8 MB2026-06-09
- 19-9707JD_CTDCast.zip51.9 MB2026-06-09
- 19-9709NH_CTDCast.zip53.4 MB2026-06-09
- 19-9712SP_CTDCast.zip8.1 MB2026-06-09
- 19-9802JD_CTDCast.zip49.3 MB2026-06-09
- 19-9802JD_CTDFinalQC.zip18.3 MB2026-06-09
- 19-9803SP_CTDCast.zip14.3 MB2026-06-09
- 19-9804JD_CTDCast.zip61.7 MB2026-06-09
- 19-9804JD_CTDFinalQC.zip27.8 MB2026-06-09
- 19-9805SP_CTDCast.zip17.2 MB2026-06-09
- 19-9807NH_CTDCast.zip68.2 MB2026-06-09
- 19-9807NH_CTDFinalQC.zip29.6 MB2026-06-09
- 19-9808SP_CTDCast.zip14.9 MB2026-06-09
- 19-9809NH_CTDCast.zip68.6 MB2026-06-09
- 19-9810SP_CTDCast.zip20.9 MB2026-06-09
- 19-9811SP_CTDCast.zip22.3 MB2026-06-09
- 19-9812SP_CTDCast.zip18.0 MB2026-06-09
- 19-9901RR_CTDCast.zip68.8 MB2026-06-09
- 19-9904JD_CTDCast.zip60.8 MB2026-06-09
- 19-9908NH_CTDCast.zip77.3 MB2026-06-09
- 19-9910NH_CTDCast.zip96.9 MB2026-06-09
- 20-0001NH_CTDCast.zip68.5 MB2026-06-09
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- 20-0101JD_CTDCast.zip63.0 MB2026-06-09
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- 20-0107NH_CTDCast.zip69.0 MB2026-06-09
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- 20-0401JD_CTDFinalQC.zip44.3 MB2026-06-09
- 20-0404NHJD_CTDFinalQC.zip43.0 MB2026-06-09
- 20-0404NH_CTDCast.zip104 MB2026-06-09
- 20-0407JD_CTDCast.zip65.9 MB2026-06-09
- 20-0407JD_CTDFinalQC.zip34.6 MB2026-06-09
- 20-0411RR_CTDCast.zip85.2 MB2026-06-09
- 20-0411RR_CTDFinalQC.zip34.7 MB2026-06-09
- 20-0501NH_CTDCast.zip74.6 MB2026-06-09
- 20-0501NH_CTDFinalQC.zip33.5 MB2026-06-09
- 20-0504NH_CTDCast.zip70.7 MB2026-06-09
- 20-0504NH_CTDFinalQC.zip37.9 MB2026-06-09
- 20-0507NH_CTDCast.zip67.7 MB2026-06-09
- 20-0507NH_CTDFinalQC.zip39.3 MB2026-06-09
- 20-0511NH_CTDCast.zip74.6 MB2026-06-09
- 20-0511NH_CTDFinalQC.zip34.9 MB2026-06-09
- 20-0602JD_CTDCast.zip93.3 MB2026-06-09
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- 20-0801JD_CTDCast.zip80.9 MB2026-06-09
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- 20-0804JD_CTDCast.zip86.7 MB2026-06-09
- 20-0804JD_CTDFinalQC.zip39.4 MB2026-06-09
- 20-0808NH_CTDCast.zip77.8 MB2026-06-09
- 20-0808NH_CTDFinalQC.zip32.5 MB2026-06-09
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- 20-0901NH_CTDFinalQC.zip33.9 MB2026-06-09
- 20-0903JD_CTDCast.zip72.2 MB2026-06-09
- 20-0903JD_CTDFinalQC.zip28.9 MB2026-06-09
- 20-0907M2_CTDCast.zip122 MB2026-06-09
- 20-0907M2_CTDFinalQC.zip64.1 MB2026-06-09
- 20-0911NH_CTDCast.zip84.3 MB2026-06-09
- 20-0911NH_CTDFinalQC.zip44.9 MB2026-06-09
- 20-1001NH_CTDCast.zip113 MB2026-06-09
- 20-1001NH_CTDFinalQC.zip38.1 MB2026-06-09
- 20-1004MF_CTDCast.zip66.8 MB2026-06-09
- 20-1004MF_CTDFinalQC.zip28.4 MB2026-06-09
- 20-1008NH_CTDCast.zip73.7 MB2026-06-09
- 20-1008NH_CTDFinalQC.zip52.6 MB2026-06-09
- 20-1011NH_CTDCast.zip65.9 MB2026-06-09
- 20-1011NH_CTDFinalQC.zip39.0 MB2026-06-09
- 20-1101NH_CTDCast.zip103 MB2026-06-09
- 20-1101NH_CTDFinalQC.zip66.7 MB2026-06-09
- 20-1104SH_CTDCast.zip61.8 MB2026-06-09
- 20-1104SH_CTDFinalQC.zip33.4 MB2026-06-09
- 20-1108NH_CTDCast.zip68.1 MB2026-06-09
- 20-1108NH_CTDFinalQC.zip31.0 MB2026-06-09
- 20-1110NH_CTDCast.zip68.5 MB2026-06-09
- 20-1110NH_CTDFinalQC.zip34.4 MB2026-06-09
- 20-1202NH_CTDCast.zip68.2 MB2026-06-09
- 20-1202NH_CTDFinalQC.zip36.9 MB2026-06-09
- 20-1203NH_CTDCast.zip196 B2026-06-09
- 20-1203SH_CTDFinalQC.zip32.9 MB2026-06-09
- 20-1207OS_CTDCast.zip64.0 MB2026-06-09
- 20-1207OS_CTDFinalQC.zip34.7 MB2026-06-09
- 20-1210NH_CTDCast.zip69.8 MB2026-06-09
- 20-1210NH_CTDFinalQC.zip36.9 MB2026-06-09
- 20-1301SH_CTDCast.zip83.4 MB2026-06-09
- 20-1301SH_CTDFinalQC.zip39.7 MB2026-06-09
- 20-1304SH_CTDCast.zip72.0 MB2026-06-09
- 20-1304SH_CTDFinalQC.zip34.6 MB2026-06-09
- 20-1307NH_CTDCast.zip69.6 MB2026-06-09
- 20-1307NH_CTDFinalQC.zip28.4 MB2026-06-09
- 20-1311NH_CTDCast.zip70.1 MB2026-06-09
- 20-1311NH_CTDFinalQC.zip30.0 MB2026-06-09
- 20-1402SH_CTDCast.zip31.5 MB2026-06-09
- 20-1402SH_CTDFinalQC.zip13.1 MB2026-06-09
- 20-1404OS_CTDCast.zip63.3 MB2026-06-09
- 20-1404OS_CTDFinalQC.zip23.7 MB2026-06-09
- 20-1407NH_CTDCast.zip90.7 MB2026-06-09
- 20-1407NH_CTDFinalQC.zip28.0 MB2026-06-09
- 20-1411NH_CTDCast.zip65.6 MB2026-06-09
- 20-1411NH_CTDFinalQC.zip37.6 MB2026-06-09
- 20-1501NH_CTDCast.zip77.5 MB2026-06-09
- 20-1501NH_CTDFinalQC.zip61.7 MB2026-06-09
- 20-1504NH_CTDCast.zip60.4 MB2026-06-09
- 20-1504NH_CTDFinalQC.zip35.0 MB2026-06-09
- 20-1507OC_CTDCast.zip60.9 MB2026-06-09
- 20-1507OC_CTDFinalQC.zip36.0 MB2026-06-09
- 20-1511OC_CTDCast.zip62.8 MB2026-06-09
- 20-1511OC_CTDFinalQC.zip37.6 MB2026-06-09
- 20-1601RL_CTDCast.zip82.2 MB2026-06-09
- 20-1601RL_CTDFinalQC.zip51.7 MB2026-06-09
- 20-1604SH_CTDCast.zip79.7 MB2026-06-09
- 20-1604SH_CTDFinalQC.zip85.3 MB2026-06-09
- 20-1607OS_CTDCast.zip55.9 MB2026-06-09
- 20-1607OS_CTDFinalQC.zip40.4 MB2026-06-09
- 20-1611SR_CTDCast.zip65.6 MB2026-06-09
- 20-1611SR_CTDFinalQC.zip47.3 MB2026-06-09
- 20-1701RL_CTDCast.zip99.9 MB2026-06-09
- 20-1701RL_CTDFinalQC.zip47.8 MB2026-06-09
- 20-1704SH_CTDCast.zip96.8 MB2026-06-09
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- 20-2208BH_CTDPrelim.zip211 MB2026-06-09
- 20-2211SR_CTDCast.zip54.1 MB2026-06-09
- 20-2211SR_CTDPrelim.zip226 MB2026-06-09
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- 20-2301RL_CTDPrelim.zip242 MB2026-06-09
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- 20-2501RL_CTDPrelim.zip330 MB2026-06-09
- 20-2502RL_CTDCast.zip1.7 MB2026-06-09
- 20-2502RL_CTDPrelim.zip7.3 MB2026-06-09
- 20-2504SH_CTDCast.zip69.0 MB2026-06-09
- 20-2504SH_CTDPrelim.zip328 MB2026-06-09
- 20-2507SR_CTDCast.zip42.9 MB2026-06-09
- 20-2507SR_CTDPrelim.zip3.9 MB2026-06-09
- 20-2511SR_CTDCast.zip32.4 MB2026-06-09
- 20-2511SR_CTDPrelim.zip2.8 MB2026-06-09
- 20-2601RL_CTDPrelim.zip7.3 MB2026-06-09
- 20-2604SH_CTDPrelim.zip7.0 MB2026-06-09
- 20-2607SH_CTDCast.zip59.4 MB2026-08-06
- 20-2607SH_CTDPrelim.zip4.9 MB2026-08-06