Measurement · Productivity & Pigments · µg/L

Bottle phaeopigment

The registry carries no authored label for this measurement, so the name above is the canonical series' own description in metadata/measurement_type.csv (variable.csv holds the authored labels, five today).

NERC P01 PHAEZZXXP06 units UGPL ug/Lkey btl_phaeopigment series btl_phaeopigment

112,720
values: 9,014
sampling events: 1993–2025
years: 1
dataset: 1–1,122 m
depth: Jan · Feb · Mar · Apr · May · Jun · Jul · Aug · Sep · Oct · Nov
seasons

Heads-up The btl_phaeopigment series from CTD Cast Files carries no flag at this grain, so its values cannot be screened this way.

Measured in

CTD Cast Files 112,720 values · 9,014 sampling events · 1993–2025 · 1–1,122 m · 91 grid cells · 127 cruises

series btl_phaeopigment · source column phaeo no flag at this grain

One row per series, one cell per year, darker with more values — the same strip the front door draws per dataset and a species page draws per taxon. Each row is one dataset's own measurement_type; the label is written once, in the title above.

By depth

Values per depth band at the release grain, one thin bar per series. The bands are the record's own (0-10 … 2000+ m).

By month

Values per calendar month, one row per series: CalCOFI's quarterly cruises show as peaks in the months the ships sail.

Range & quality

bounds: The registry declares 0 … 100 µg/L for btl_phaeopigment; a value outside it is dropped at the ingest (drop_out_of_bounds()).
observed: CTD Cast Files btl_phaeopigment 0 · median 0.122 · 12.35 µg/L (5th–95th percentile 0.02–0.65)
flags: CTD Cast Files btl_phaeopigment carries no quality code at the release grain; qual_ok keeps all 112,720.
baseline: A monthly climatology exists for this measurement (the release's climatology table: 1993–2013, dataset × grid cell × calendar month × 10 m bin), so the Explorer can draw anomalies against it rather than values.

Related measurements

Phaeopigment measured fluorometrically phaeopigment · Hydrographic Bottle · 1973–2021 · 245,665 values · P01 PHAEZZXX the same quantity from the CTD files' own bottle samples — plausibly the same physical bottles, so merging them would count the bottle dataset twice

The same quantity from another platform or another kind of sample, each its own page and never merged into this one: a dataset's own bottle samples would count that dataset twice, an underway intake is not a cast, and a replicate is not a mean. The reason is the record's (related[].why).

Ways in

Explorermaps, sections and time series of this measurement — opens prefilled
https://calcofi.io/explore/?var=btl_phaeopigment
Explorer · a depth section vs normalthe newest cruise's section against the climatology baseline
https://calcofi.io/explore/?lens=section&var=btl_phaeopigment&anom=1
db-querySQL in your browser — the shell opens with this query
https://calcofi.io/db-query/?sql=SELECT+%2A+FROM+__TBL%3Aobs_env__+WHERE+measurement_type+%3D+%27btl_phaeopigment%27+LIMIT+100%3B
ERDDAP · CTD Cast FilesCalCOFI's own server, the CTD Cast Files table constrained to this series
https://erddap.calcofi.io/erddap/tabledap/calcofi_ctd-cast.html?&measurement_type=%22btl_phaeopigment%22
Parquetobs_env is partitioned by measurement_type in the content-addressed store — resolved through the release catalog, never a path built by hand
```
SELECT * FROM read_json('…/v2026.09.10/catalog.json')
-- objects[] WHERE table = 'obs_env'
--   AND partition_value = 'btl_phaeopigment'
```

library(calcofi4r)
con <- cc_get_db()                      # the promoted release
tbl(con, "obs_env") |> filter(measurement_type %in% c("btl_phaeopigment"))

Python

import calcofi4py as cc
con = cc.cc_get_db()
con.sql("SELECT * FROM obs_env WHERE measurement_type IN ('btl_phaeopigment')").df()

This page as data

JSONthis measurement's entry of the release record, verbatim
https://calcofi.io/measurements/btl_phaeopigment.json

Read from measurements.json of release v2026.09.10, written at release by calcofi4db::build_measurements_catalog() beside taxa.json. The catalog's index is /measurements/; the JSON-LD on this page is a schema.org/DefinedTerm in the NERC P01 term set with a PropertyValue per series.

Cite

Cite the release; each dataset's own citation, licence and DOI are on its page — CTD Cast Files. The Explorer's Share → Cite writes it for the view you make.