CalCOFI CalCOFI CalCOFI.io open data ecosystem

Euphausiids (Krill)

CCE-LTER Euphausiid Abundance

cce-lter_euphausiidsCCE-LTERCustom terms stated by the providerdoi:10.6073/pasta/4a92a0044bcd1523a4f994ece874a57dv2026.09.05ingested

years
1951–2019
observations
100,505
sampling events
7,477
stations
114
taxa
37
observations per year, 1951–2019
st140-ln60_hist · 17 obsst160-ln60_hist · 17 obsst180-ln60_hist · 19 obsst200-ln60_hist · 16 obsst200-ln70_hist · 17 obsst200-ln80_hist · 22 obsst140-ln90_hist · 169 obsst160-ln90_hist · 20 obsst180-ln90_hist · 29 obsst200-ln90_hist · 19 obsst40-ln100_hist · 26 obsst70-ln60 · 580 obsst80-ln60 · 434 obsst90-ln60 · 391 obsst70-ln63.3 · 545 obsst100-ln60 · 121 obsst80-ln63.3 · 329 obsst90-ln63.3 · 410 obsst70-ln66.7 · 879 obsst100-ln63.3 · 92 obsst80-ln66.7 · 532 obsst90-ln66.7 · 370 obsst70-ln70 · 808 obsst100-ln66.7 · 112 obsst80-ln70 · 548 obsst90-ln70 · 546 obsst70-ln73.3 · 643 obsst100-ln70 · 130 obsst80-ln73.3 · 448 obsst90-ln73.3 · 428 obsst70-ln76.7 · 1,330 obsst100-ln73.3 · 103 obsst80-ln76.7 · 965 obsst90-ln76.7 · 486 obsst70-ln80 · 1,998 obsst100-ln76.7 · 189 obsst80-ln80 · 1,096 obsst90-ln80 · 456 obsst70-ln83.3 · 1,677 obsst100-ln80 · 183 obsst80-ln83.3 · 1,190 obsst90-ln83.3 · 581 obsst70-ln86.7 · 1,713 obsst100-ln83.3 · 275 obsst80-ln86.7 · 1,213 obsst110-ln83.3 · 77 obsst90-ln86.7 · 696 obsst70-ln90 · 2,303 obsst100-ln86.7 · 269 obsst80-ln90 · 1,531 obsst110-ln86.7 · 62 obsst90-ln90 · 663 obsst70-ln93.3 · 1,821 obsst100-ln90 · 447 obsst80-ln93.3 · 1,226 obsst110-ln90 · 149 obsst90-ln93.3 · 803 obsst120-ln90 · 189 obsst100-ln93.3 · 368 obsst110-ln93.3 · 94 obsst120-ln93.3 · 114 obsst60-ln60 · 577 obsst50-ln60 · 360 obsst55-ln60 · 538 obsst50-ln63.3 · 571 obsst55-ln63.3 · 572 obsst60-ln63.3 · 665 obsst45-ln66.7 · 6 obsst50-ln66.7 · 888 obsst55-ln66.7 · 623 obsst60-ln66.7 · 687 obsst50-ln70 · 470 obsst55-ln70 · 667 obsst60-ln70 · 679 obsst50-ln73.3 · 432 obsst55-ln73.3 · 573 obsst60-ln73.3 · 576 obsst50-ln76.7 · 1,487 obsst55-ln76.7 · 1,358 obsst60-ln76.7 · 1,194 obsst45-ln80 · 8 obsst50-ln80 · 1,343 obsst55-ln80 · 1,708 obsst60-ln80 · 2,022 obsst40-ln83.3 · 1,737 obsst45-ln83.3 · 2,000 obsst50-ln83.3 · 1,661 obsst30-ln86.7 · 43 obsst55-ln83.3 · 1,890 obsst35-ln86.7 · 2,491 obsst60-ln83.3 · 2,140 obsst40-ln86.7 · 2,113 obsst45-ln86.7 · 1,831 obsst50-ln86.7 · 1,317 obsst30-ln90 · 4,000 obsst55-ln86.7 · 1,698 obsst35-ln90 · 2,862 obsst60-ln86.7 · 2,003 obsst40-ln90 · 116 obsst45-ln90 · 1,932 obsst25-ln93.3 · 935 obsst50-ln90 · 391 obsst30-ln93.3 · 3,277 obsst55-ln90 · 1,701 obsst35-ln93.3 · 1,795 obsst60-ln90 · 2,112 obsst40-ln93.3 · 2,111 obsst45-ln93.3 · 1,795 obsst50-ln93.3 · 1,981 obsst55-ln93.3 · 1,434 obsst60-ln93.3 · 1,895 obsst110-ln60_hist · 56 obsst110-ln70_hist · 115 obsst110-ln80_hist · 65 obs130°W125°W120°W30°N35°Nextent continues beyond the frame
114 CalCOFI stations sampled, sized by observations, over the survey grid; the record’s extent continues beyond the frame.

Overview

Species- and life-stage-resolved euphausiid (krill) abundance from CalCOFI / CCE-LTER net tows (BTEDB export), 1951-present, one row per tow x species x life stage. Supersedes the prior single-Abundance- column ingest, which had no taxonomic scope (Q02, now resolved) — units remain provisional pending provider confirmation (Q01).

Principal investigators
Rasmus Swalethorp · Linsey Sala
Keywords
EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON > ZOOPLANKTONEARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL)

Coverage

1 variable

euphausiid_abundance

Life stages

adultcalyptopiscalyptopis C1calyptopis C2calyptopis C3damagedfurciliafurcilia F1furcilia F2furcilia F3furcilia F4furcilia F5furcilia F6furcilia F7juvenilelarvaemetanauplius

Access

Every endpoint this dataset can be reached through, grouped by how you would use it. Every URL is in the release record and answered when the release was cut.

Explore

Apps that read this dataset from the release. A row marked “this dataset” opens with it already selected.

CalCOFI Explorerthis datasetAcross datasets

https://calcofi.io/explore/?datasets=cce-lter_euphausiids

Station Explorerthis datasetAcross datasets

https://app.calcofi.io/station/?dataset=cce-lter_euphausiids

Hexagon Explorerthis datasetAcross datasets

https://app.calcofi.io/hex/?datasets=cce-lter_euphausiids

Cruise Explorerthis datasetAcross datasets

https://app.calcofi.io/cruise/?datasets=cce-lter_euphausiids

Station Data Portalthe appstudent contribution

https://calcofi.io/2026-ucsb-station-data-portal/

Query

SQL against the release itself, in the browser — nothing to install and nothing downloaded until a query asks for it. __TBL:obs__ resolves to the pinned release’s parquet.

db-query — the SQL shell, prefilledDuckDB-WASM over the released parquet, in your browser
-- cce-lter_euphausiids in the CalCOFI release v2026.09.05
SELECT *
FROM __TBL:obs__
WHERE dataset_key = 'cce-lter_euphausiids'
LIMIT 100;

https://calcofi.io/db-query/?sql=--+cce-lter_euphausiids+in+the+CalCOFI+release+v2026.09.05%0ASELECT+%2A%0AFROM+__TBL%3Aobs__%0AWHERE+dataset_key+%3D+%27cce-lter_euphausiids%27%0ALIMIT+100%3B#sql-shell--shell

Code

The same release, from a script.

con <- calcofi4r::cc_get_db()
calcofi4r::cc_cite("cce-lter_euphausiids")
con = calcofi4py.cc_get_db()
calcofi4py.cite("cce-lter_euphausiids")
DuckDB, anywhereno CalCOFI package needed — the object is a plain parquet file
SELECT * FROM read_parquet('https://storage.googleapis.com/calcofi-db/ducklake-staging/tables/obs/dataset_key=cce-lter_euphausiids/eb06f688035ebc51fe036938/data_0.parquet') LIMIT 100;

Get the data

Every way to have the bytes, by source. Nothing here asks you to register first.

Files from the release (Parquet)

The frozen objects this release is made of. A partition holds only this dataset’s rows; a shared table holds every dataset’s, so filter on dataset_key.

obsthis dataset’s rows · 694 KB · since v2026.09.04sha256 841d387165b8…

https://storage.googleapis.com/calcofi-db/ducklake-staging/tables/obs/dataset_key=cce-lter_euphausiids/eb06f688035ebc51fe036938/data_0.parquet

CF netCDF

One self-describing file, for a tool that reads netCDF.

CF netCDF39.9 MBsha256 931771b0805e…
how far this file is CF

Fully CF: each row is an independent observation with its own time and position, which is a CF point collection. Rows are at the OCCURRENCE grain (event x taxon x life stage x depth), not the event grain, so a sample with many taxa contributes many points. This dataset records no observation depth; CF's point feature does not require one.

https://storage.calcofi.io/calcofi-files-public/netcdf/cce-lter_euphausiids/v2026.09.04/cce-lter_euphausiids.nc

ERDDAP (erddap.calcofi.io)

One ERDDAP dataset per grain, each with its own data formats and its own pages. Subset in the browser or query it from a script.

ERDDAP dataset grain data & pagescce-lter_euphausiids observations CSVnetCDFJSON pageinfograph cce-lter_euphausiids_sample sampling events CSVnetCDFJSON pageinfograph
observations
one row per measurement, joined to the event it was taken on
sampling events
one row per cast, tow or transect — when, where and how it was sampled

Legacy ids, still answering until 2026-12-04: calcofi_euphausiids (replaced by cce-lter_euphausiids)

Metadata records

Records about the data, in the standards each portal harvests.

ISO 19115-3XML, from the ERDDAP WAF

https://erddap.calcofi.io/erddap/metadata/iso19115/xml/cce-lter_euphausiids_iso19115.xml

https://erddap.calcofi.io/erddap/metadata/fgdc/xml/cce-lter_euphausiids_fgdc.xml

JSON-LD (schema.org/Dataset)what this page publishes to Google Dataset Search

https://calcofi.io/datasets/cce-lter_euphausiids.jsonld

the record, verbatimthe release’s own entry for this dataset — everything on this page comes from it

https://calcofi.io/datasets/cce-lter_euphausiids.json

DCAT-US 1.1the whole catalog, for data.gov and any CKAN

https://calcofi.io/data.json

STAC collectionone Collection per dataset, an Item per release

https://calcofi.io/stac/#/collections/cce-lter_euphausiids/collection.json

Archives & portals

Where this dataset is registered outside calcofi.io, by the identifier each portal knows it as.

ERDDAP (calcofi.io)cce-lter_euphausiidspublished

https://erddap.calcofi.io/erddap/info/cce-lter_euphausiids/index.html

OBISn/a
EDIplannedissue ↗
NCEIn/a
CalOOSplanned
Zenodo10.5281/zenodo.22281994publishedas part of the integrated database release

https://doi.org/10.5281/zenodo.22281994

EDIknb-lter-cce.313externalsource

https://portal.edirepository.org/nis/mapbrowse?scope=knb-lter-cce&identifier=313

Everything here is open — nothing on calcofi.io asks you to register first. If this dataset ends up in something you build or publish, register your use so it can be credited and linked back; to hear when a release changes it, stay informed. Questions: data@calcofi.io.

Cite

Ohman, M.D. 2022. California Current Ecosystem Euphausiid data, Brinton and Townsend Euphausiid Database (BTEDB) ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/4a92a0044bcd1523a4f994ece874a57d
License: custom (https://portal.edirepository.org/nis/metadataviewer?packageid=knb-lter-cce.313.1)
DOI: https://doi.org/10.6073/pasta/4a92a0044bcd1523a4f994ece874a57d
Acknowledgement: Data originate from the Brinton and Townsend Euphausiid Database of the Pelagic Invertebrate Collection, Scripps Institution of Oceanography. Supported in recent years by NSF grants to M.D. Ohman and the CCE-LTER site.
BibTeX
@misc{cce-lter_euphausiids,
  title        = {CCE-LTER Euphausiid Abundance},
  howpublished = {Ohman, M.D. 2022. California Current Ecosystem Euphausiid data, Brinton and Townsend Euphausiid Database (BTEDB) ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/4a92a0044bcd1523a4f994ece874a57d},
  year         = {2022},
  doi          = {10.6073/pasta/4a92a0044bcd1523a4f994ece874a57d},
  url          = {https://doi.org/10.6073/pasta/4a92a0044bcd1523a4f994ece874a57d},
  note         = {License: custom (https://portal.edirepository.org/nis/metadataviewer?packageid=knb-lter-cce.313.1); Acknowledgement: Data originate from the Brinton and Townsend Euphausiid Database of the Pelagic Invertebrate Collection, Scripps Institution of Oceanography. Supported in recent years by NSF grants to M.D. Ohman and the CCE-LTER site.}
}

Acknowledgement. Data originate from the Brinton and Townsend Euphausiid Database of the Pelagic Invertebrate Collection, Scripps Institution of Oceanography. Supported in recent years by NSF grants to M.D. Ohman and the CCE-LTER site.

…and the release it came from

CalCOFI (2026). CalCOFI Integrated Database, release v2026.09.05 [Data set]. Scripps Institution of Oceanography, NOAA Fisheries, and California Department of Fish and Wildlife. https://calcofi.io/db-schema/?v=v2026.09.05
BibTeX
@misc{calcofi_release_v2026_09_05,
  title     = {CalCOFI Integrated Database, release v2026.09.05},
  author    = {CalCOFI},
  year      = {2026},
  publisher = {Scripps Institution of Oceanography, NOAA Fisheries, and California Department of Fish and Wildlife},
  url       = {https://calcofi.io/db-schema/?v=v2026.09.05}
}