Read

functions reading data, particularly from the CalCOFI API

get_cruises()

Get cruises from CalCOFI API

get_raster()

Get raster of interpolated values from CalCOFI API

get_timeseries()

Get timeseries summary from CalCOFI API

get_variables()

Get variables from CalCOFI API

Analyze

functions for analyzing data

get_oceano_var_aoi()

Get oceanographic variable for area of interest

pts_to_contours_gam()

Interpolate points to contours using a Generalized Additive Model (GAM)

pts_to_rast_idw()

Interpolate points to raster using Inverse-Distance Weighting (IDW)

rast_to_contours()

Raster to contour polygons

Visualize

functions for visualizing data

map_raster()

Map raster interactively

plot_depth()

Plot interactive depth of an oceanographic variable

plot_timeseries()

Plot interactive time series of an oceanographic variable

Data

small lookup and example datasets not requiring API access

bottle_temp_depth

Bottle data of temperature with depth (m)

bottle_temp_lonlat

Bottle data of temperature in space (latitude, longitude)

cc_bottle

Bottle data in space and time

cc_grid

CalCOFI Grid for Extracting Effort

cc_grid_ctrs

CalCOFI Grid Centroids for Extracting Effort

cc_grid_zones

CalCOFI Grid Zones

cc_places

CalCOFI Places

stations

Oceanographic stations

Database

functions specific to database (Admin only)

cc_db_connect()

Connect to the CalCOFI PostgreSQL database (Admin only)

create_index()

Create index in database

Other

check for other functions or datasets not captured by above categories