CalCOFI.io CalCOFI.io open data ecosystem

Chlorophyll maximum

Chlorophyll-a at its maximum: the 3 m running mean at chl_max_depth

µg/Lkey chl_maxP06 units UGPLseries chl_max

one value per cast One value per cast. This measurement is worked out once for each cast rather than read at every depth, so it has no depth profile and no anomaly against a normal; its values are rows of sample_measurement, not of obs_env.

CalCOFI holds 9,255 values of it from 9,255 sampling events in one dataset, 1993–2026, one per cast.R Chlorophyll peaks at a depth rather than at the surface, and the height of that peak is how much plant life the water column holds at its richest layer: the base of the food web the rest of the survey counts.C

9,255
values
0
flagged
1993–2026
years
1
dataset
every month
months
stands in: chlorophyll-a measured fluorometrically’s face, the smoothed maximum of the CTD fluorescence profileNo definition of its own: the estimate is described by its derivation, under How it is measured.

Measured in 1 dataset
i

One row per series, one cell per year, darker with more values — the same strip the front door draws per dataset and a species page draws per taxon. Each row is one dataset's own measurement_type; the label is written once, in the title above.

  • 9,255 values · 9,255 sampling events · 1993–2026 · 109 grid cells · 136 cruises
    series chl_max · source column est_chlorophyll_a_sta_corr one value per cast sensor mean no flag at this grain no P01 concept

Explorerdb-queryThis page as JSON R · Python · Parquet

Every way in 6 ways · Parquet · R · Python · JSON

Read from measurements.json of release v2026.10.21, written at release by calcofi4db::build_measurements_catalog() beside taxa.json. The catalog's index is /measurements/; the JSON-LD on this page is a schema.org/DefinedTerm in the NERC P01 term set with a PropertyValue per series.

Explorerdb-query
Parquetsample_measurement holds one row per cast and measurement_type, in the content-addressed store — resolved through the release catalog, never a path built by hand
SELECT * FROM read_json('…/v2026.10.21/catalog.json')
-- objects[] WHERE table = 'sample_measurement'
-- then filter the rows:
--   measurement_type IN ('chl_max')
The structure chlorophyll-a measured fluorometrically’s, standing in
C55H72MgN4O5 chlorophyll a CHEBI:18230 · 893.509 g/mol · the_thing
C55H74N4O5 pheophytin a CHEBI:44898 · 871.220 g/mol · method_product

RDKit 2026.03.6 from the ChEBI molfile, in the page’s ink · CC BY 4.0. ChEBI’s roles are never shown.

How it is measured Computed from the CTD fluorometer profile (corrected to bottle chlorophyll-a)
CTD sensor
CTD Derived Products · CTD sensor
Computed from the CTD fluorometer profile (corrected to bottle chlorophyll-a)

Chlorophyll-a at its maximum: the smoothed value (3 m running mean) at the depth of the maximum. (the record's own derivation (measurement_type.csv); questions Q02 (Rasmus Swalethorp, 2026-09-23))

  • smooth the 1 m profile with a 3 m running mean
  • take the highest smoothed value
no flag at this grain
Why it matters 4 ways to say it · EOV Phytoplankton biomass and diversity
Essential Ocean Variable
Phytoplankton biomass and diversity

the GOOS specification sheet for this Essential Ocean Variable lists it

GOOS specification sheet ↗

other ways to say why · 3
  • authored It is the smoothed value at the depth of the maximum, taken from the CTD fluorometer corrected to bottle chlorophyll-a, so a single narrow spike is not read as the peak. needs a citation before it can be the pick
  • Wikipedia Chlorophyll a source
  • Wikipedia The deep chlorophyll maximum (DCM), also called the subsurface chlorophyll maximum, is the region below the surface of water with the maximum concentration of chlorophyll. The DCM generally exists at the same depth as the nutricline, the region of the ocean where the greatest change in the nutrient concentration occurs with depth. Deep chlorophyll maximum · CC BY-SA 4.0 · rev. 1374126571
Units and range µg/L · 0 … 1000 declared · 0 flagged

µg/L (ug/L in metadata/measurement_type.csv) · P06 units UGPL

bounds0 … 1000 µg/Lobserved0.0059 … 83.16 µg/Lflagged0baselineclimatology ✓
details
bounds
The registry declares 0 … 1000 µg/L for chl_max; a value outside it is dropped at the ingest (drop_out_of_bounds()).
observed
CTD Derived Products chl_max 0.0059 · median 0.7631 · 83.16 µg/L (5th–95th percentile 0.2528–6.356)
flags
CTD Derived Products chl_max carries no quality code at the release grain; qual_ok keeps all 9,255.
baseline
A monthly climatology exists for this measurement (the release's climatology table: 1993–2013, dataset × station × the cruise's month × 10 m bin), so the Explorer can draw anomalies against it rather than values.
derivation
calcofi4db::ctd_chl_max(window_m = 3): the 3 m running mean of est_chlorophyll_a_sta_corr at chl_max_depth (questions Q02)

The familiar scale
i

Bars are each series' 5th–95th percentile, the line its minimum to maximum, the ring its median; the marks are metadata/measurement_scale.csv's, each hovering to its own source.

By month every month

By month
i

Values per calendar month, one row per series: CalCOFI's quarterly cruises show as peaks in the months the ships sail.

Cite the release, v2026.10.21

Cite the release; each dataset's own citation, licence and DOI are on its page — CTD Derived Products. The Explorer's Share → Cite writes it for the view you make.